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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10094308 chr8:10263707 C/T VPS37A chr8:17104080-17159936:+ 0.76 7.78 6.9E-14 Box Plot
BLCA rs10094308 chr8:10263707 C/T WRN chr8:30891317-31031285:+ 0.58 6.59 1.45E-10 Box Plot
BLCA rs10094308 chr8:10263707 C/T XPO7 chr8:21777182-21864096:+ 0.82 8.27 2.25E-15 Box Plot
BLCA rs10095602 chr8:54581599 C/T PRPF18 chr10:13628927-13672868:+ -0.88 -6.54 1.95E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T CHMP7 chr8:23101150-23119513:+ 0.6 6.34 6.58E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T CNOT7 chr8:17082473-17104387:- 0.72 7.41 8.19E-13 Box Plot
BLCA rs10096698 chr8:20192293 A/T DCTN6 chr8:30013813-30041156:+ 0.6 5.97 5.47E-9 Box Plot
BLCA rs10096698 chr8:20192293 A/T ELP3 chr8:27947190-28048673:+ 0.67 6.51 2.32E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T FAM160B2 chr8:21946670-21962409:+ 0.54 6.31 7.55E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T INTS9 chr8:28625178-28747759:- 0.67 6.55 1.84E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T KIAA1967 chr8:22462257-22477981:+ 0.72 7.34 1.33E-12 Box Plot
BLCA rs10096698 chr8:20192293 A/T LEPROTL1 chr8:29952914-30034724:+ 0.73 7.15 4.36E-12 Box Plot
BLCA rs10096698 chr8:20192293 A/T PPP2CB chr8:30631973-30671830:- 0.57 6.32 7.1E-10 Box Plot
BLCA rs10096698 chr8:20192293 A/T TMEM66 chr8:29920528-29939940:- 0.54 6.08 2.96E-9 Box Plot
BLCA rs10096698 chr8:20192293 A/T VPS37A chr8:17104080-17159936:+ 0.64 6.64 1.1E-10 Box Plot